BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B05LP1|AL429685
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1469 1224 0.0
3x_Contig639 149 1e-35
>3x_Contig1469
Length = 9240
Score = 1224 bits (617), Expect = 0.0
Identities = 628/631 (99%), Gaps = 1/631 (0%)
Strand = Plus / Minus
Query: 266 tacatagtccttgtgcttttccaagaacccaaacttgcttctctcttgaacttgcgaccg 325
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240 tacatagtccttgtgctttcccaagaacccaaacttgcttctctcttgaacttgcgaccg 9181
Query: 326 ctcacggtgctgtttcttctgcacagagtgctgcaggttacccattgttgtgttgttcgc 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9180 ctcacggtgctgtttcttctgcacagagtgctgcaggttacccattgttgtgttgttcgc 9121
Query: 386 gttctggttctactcgagctgtgtctctgttgaagaattaagaccccgttgatagtctat 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9120 gttctggttctactcgagctgtgtctctgttgaagaattaagaccccgttgatagtctat 9061
Query: 446 tcagctcttcgaacgtcatgtgtcaaacctatctcatctcatctcatcgctttaaagttt 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9060 tcagctcttcgaacgtcatgtgtcaaacctatctcatctcatctcatcgctttaaagttt 9001
Query: 506 tcactttcgtttctttcactatgtacgtgtgcgggtaacgctcgatagattcccaaaact 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9000 tcactttcgtttctttcactatgtacgtgtgcgggtaacgctcgatagattcccaaaact 8941
Query: 566 cacaatatatcatcaccgtcatctcgacacacttggcaatacttgatatacctgttatta 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8940 cacaatatatcatcaccgtcatctcgacacacttggcaatacttgatatacctgttatta 8881
Query: 626 gccagttgtttcccttcgggacccaagctcgacgttcaccatgtctcttgtgtccatttc 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8880 gccagttgtttcccttcgggacccaagctcgacgttcaccatgtctcttgtgtccatttc 8821
Query: 686 ggagggagttcgtgcaggtttggtgctgaaaagacatgtggtttgtttcactggaacttc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8820 ggagggagttcgtgcaggtttggtgctgaaaagacatgtggtttgtttcactggaacttc 8761
Query: 746 taatgatcaaggtttaaagtccatatccgatctgctatctcacatggataaccctgccgt 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8760 taatgatcaaggtttaaagtccatatccgatctgctatctcacatggataaccctgccgt 8701
Query: 806 accgtccccacaatcatgcagtattgatagcttaccggatactgaaacg-mgaatggcat 864
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8700 accgtccccacaatcatgcagtattgatagcttaccggatactgaaacgcagaatggcat 8641
Query: 865 ttcatgttatctagtaccgtatagtggtact 895
|||||||||||||||||||||||||||||||
Sbjct: 8640 ttcatgttatctagtaccgtatagtggtact 8610
>3x_Contig639
Length = 2382
Score = 149 bits (75), Expect = 1e-35
Identities = 155/179 (86%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 1 ttttcttcttctcactcttacgcgactccactagcctcatcgtacgcacgtaattgctgt 60
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 2205 ttttcttcttctcactcttacgcgactccattagcttcatcgtacgcacgtaattgctgt 2264
Query: 61 cctgcgtcttcaaaagcttcacttgatccatg-ttcaataccccatcggattcttcacca 119
| ||||| |||||||| |||| ||| ||| || |||| |||||| |||| || | |||||
Sbjct: 2265 cttgcgttttcaaaagtttcatttg-tccctgtttcattaccccttcggtttttacacca 2323
Query: 120 ccgtgcctgctggttatcaatagcccatcagaccccaatttctttgagttcattccaaa 178
|||||| || ||| ||| |||||| |||||||||| ||| ||||||||| |||||||
Sbjct: 2324 ccgtgcttgtaggtgttcattagcccttcagaccccattttttttgagttctttccaaa 2382
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6688
Number of Sequences: 1807
Number of extensions: 6688
Number of successful extensions: 336
Number of sequences better than 1.0e-20: 2
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)